2024

1、Xiaoli Tan, Mujie Zhang, Shunzhang Liu, Xiang Xiao, Yu Zhang, Huahua Jian. Prophage enhances the ability of deep-sea bacterium Shewanella psychrophila WP2 to utilize D-amino acid[J]. Microbiology Spectrum, 2024, 12(2): e03263-23.

https://doi.org/10.1128/spectrum.03263-23

2、Pengbo Jiao, Ying Zhou, Xingxing Zhang, Huahua Jian, Xu-Xiang Zhang, Liping Ma. Mechanisms of horizontal gene transfer and viral contribution to the fate of intracellular and extracellular antibiotic resistance genes in anaerobic digestion supplemented with conductive materials under ammonia stress[J]. Water Research, 2024, 267: 122549.

https://doi.org/10.1016/j.watres.2024.122549

3、Qi Qi, Shijie Ning, Xue Guo, Jianshu Zhao, Renmao Tian, Haoran Gui, Jin-Sheng He, Hao Wang, Zhenhua Zhang, Konstantinos T. Konstantinidis, Qun Gao, Yuxin Wang, Shunyi Li, Weishu Zhao, Yunfeng Yang, Jizhong Zhou. More sensitive microbial responses to the interactive effects of warming and altered precipitation in subsoil than topsoil of an alpine grassland ecosystem[J]. Global Change Biology, 2024, 30(9): e17487.

https://doi.org/10.1111/gcb.17487

4、Aoran Hu, Weishu Zhao, Jing Wang, Qi Qi, Xiang Xiao, Hongmei Jing. Microbial communities reveal niche partitioning across the slope and bottom zones of the challenger deep[J]. Environmental Microbiology Reports, 2024, 16(4): e13314.

https://doi.org/10.1111/1758-2229.13314

5、Zhihao Zhang, Yongqin Liu, Keshao Liu, Yuying Chen, Xuezi Guo, Mukan Ji & Weishu Zhao . Supraglacial and subglacial ecosystems contribute differently towards proglacial ecosystem communities in Kuoqionggangri Glacier, Tibetan Plateau[J]. Communications Earth & Environment, 2024, 5(1): 636.

https://doi.org/10.1038/s43247-024-01809-6

6、Yongfeng Ye, Xiaoxia Chen, Juan Huang, Lirong Zheng, Qingxue Tang, Liuliu Long, Takeshi Yamada, Madhusudan Tyagi, Victoria García Sakai,Hugh O’Neill, Qiu Zhang, Nicolas R. de Souza, Xiang Xiao4, Weishu Zhao, Liang Hong, and Zhuo Liu. Dynamic entity formed by protein and its hydration water[J]. Physical Review Research, 2024, 6(3): 033316.

https://doi.org/10.1103/PhysRevResearch.6.033316

7、Gang Xiao, Zishuai Wang, Yu Jin and Fengping Wang. Visible-light-driven selective cleavage of lignin CC bonds on the TiO2@ g-C3N4 heterostructured photocatalyst[J]. Nanotechnology, 2024, 35(49): 495704.

https://doi.org/10.1088/1361-6528/ad7b3f

8、Raquel Peixoto, Christian R. Voolstra, Lisa Y. Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A. Amin, Max Häggblom, Ann Gregory, Thulani P. Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T. Lennon, Antonio Ventosa, Patrik M. Bavoil, Virginia Miller & Jack A. Gilbert. Microbial solutions must be deployed against climate catastrophe[J]. FEMS microbiology ecology, 2024, 100(11): fiae144.

https://www.nature.com/articles/s41467-024-53680-w

9、Niroshan Gajendra, Longhui Deng, Timothy I. Eglinton, Carsten J. Schubert, Mark A. Lever. Impacts of temperature and fluid seepage on organic matter composition in sediments of an active hydrothermal basin[J]. Organic Geochemistry, 2024, 196: 104829.

  https://doi.org/10.1016/j.orggeochem.2024.104829

10、Tiantian Yu, Lin Fu, Yinzhao Wang, Yijing Dong, Yifan Chen, Gunter Wegener, Lei Cheng & Fengping Wang. Thermophilic Hadarchaeota grow on long-chain alkanes in syntrophy with methanogens[J]. Nature Communications, 2024, 15(1): 6560.

https://www.nature.com/articles/s41467-024-50883-z

11、Sidra Erum Ishaq, Tariq Ahmad, Lewen Liang, Ruize Xie, Tiantian Yu, Yinzhao Wang & Fengping Wang. Cultivation of diverse novel marine bacteria from   deep ocean sediment using spent culture supernatant of Ca. Bathyarchaeia enrichment[J]. Journal of Microbiology, 2024, 62(8): 611-625.

https://link.springer.com/article/10.1007/s12275-024-00145-w

12、Tariq Ahmad, Sidra Erum Ishaq, Lewen Liang, Jialin Hou, Ruize Xie, Yijing Dong, Tiantian Yu, Fengping Wang. Description of the first cultured representative of “Candidatus Synoicihabitans” genus, isolated from deep-sea sediment of South China Sea[J]. Systematic and Applied Microbiology, 2024, 47(2-3): 126490.

https://doi.org/10.1016/j.syapm.2024.126490

13、Yunge Jing, Taoliang Zhang, Ben Zhu, Jingtao Zhao,Xiaoxiao Zhao, Yanguang Dou, Qing Li, Feng Cai,Bangqi Hu and Liang Dong. Organic carbon burial and their implication on sea surface primary productivity in the middle Okinawa Trough over the past 200 ka[J]. Frontiers in Marine Science, 2024, 11: 1331940.

https://doi.org/10.3389/fmars.2024.1331940

14、Wenshen Xiao, Leonid Polyak, Taoliang Zhang, Rujian Wang, Xiao Duan, Yan Tu, Yangqing Hu, Yanyan Pan. Depositional and circulation changes at the Chukchi margin, Arctic Ocean, during the last two glacial cycles[J]. Global and Planetary Change, 2024, 233: 104366.

    https://doi.org/10.1016/j.gloplacha.2024.104366  

15、Rui Lu, Denghui Li, Yang Guo, Zhen Cui, Zhanfei Wei, Guangyi Fan, Weijia Zhang, Yinzhao Wang, Ying Gu, Mo Han, Shanshan Liu, Liang Meng. Comparative metagenomics highlights the habitat-related diversity in taxonomic composition and metabolic potential of deep-sea sediment microbiota[J]. Heliyon, 2024, 10(22).

https://doi.org/10.1016/j.heliyon.2024.e39055

16、Yuxin Tao, Zichao Zeng, Yuhui Deng, Menghan Zhang, Fengping Wang, Yinzhao Wang. Phylogeny and evolution of dissimilatory sulfite reduction in prokaryotes[J]. Molecular Phylogenetics and Evolution, 2024, 201: 108208.

https://doi.org/10.1016/j.ympev.2024.108208

17、Tariq Ahmad, Sidra Erum Ishaq, Lewen Liang, Ruize Xie, Yinzhao Wang & Fengping Wang. A diffusion-based integrative approach for culturing previously uncultured bacteria from marine sediments[J]. Marine Life Science & Technology, 2024: 1-12.    

https://link.springer.com/article/10.1007/s42995-024-00240-2  

    18、Linhao Cui, Kelei Zhu, Ruiyun Li, Chao Chang, Laiyuan Wu, Wei Liu, Dongjing Fu, Peiyu Liu, Hao Qiu, Guoqiang Tang, Qiuli Li, Robert R. Gaines, Yuxin Tao, Yinzhao Wang, Jinhua Li, Xingliang Zhang. The Cambrian microfossil Qingjiangonema reveals the co-evolution of sulfate-reducing bacteria and the oxygenation of Earth’s surface[J]. Science Bulletin, 2024, 69(10): 1486-1494.  

https://doi.org/10.1016/j.scib.2024.03.001

19、Pengfei Zhu, Jialin Hou, Yixuan Xiong, Ruize Xie, Yinzhao Wang, Fengping Wang. Expanded Archaeal Genomes Shed New Light on the Evolution of Isoprenoid Biosynthesis[J]. Microorganisms, 2024, 12(4): 707.

https://doi.org/10.3390/microorganisms12040707

20、Raquel Peixoto, Christian R Voolstra, Lisa Y Stein, Philip Hugenholtz, Joana Falcao Salles, Shady A Amin, Max Häggblom, Ann Gregory, Thulani P Makhalanyane, Fengping Wang, Nadège Adoukè Agbodjato, Yinzhao Wang, Nianzhi Jiao, Jay T Lennon, Antonio Ventosa, Patrik M Bavoil, Virginia Miller, Jack A Gilbert. Microbial solutions must be deployed against climate catastrophe[J]. FEMS microbiology ecology, 2024, 100(11): fiae144.      

https://doi.org/10.1093/femsec/fiae144

21、Rui Lei, Xi-Peng Liu. Rapid one-pot human single nucleotide polymorphism genotyping platform with Cas13a nuclease[J]. Journal of bioscience and bioengineering, 2024, 138(6): 469-477.

22、Yinzhao Wang, Liuyang Li, Qiang Li, Yaoxun Hu, Wenjie Li, Zhile Wu, Hungchia Huang, Zhenbo Lv, Wan Liu, Ruifang Cao, Guoping Zhao, Fengping Wang, Guoqing Zhang. MASH‐Ocean 1.0: Interactive platform for investigating microbial diversity, function, and biogeography with marine metagenomic data[J]. iMeta, 2024: e201.
23、Yue Dou, Xuefeng Zhou, Xipeng Liu & Jingli Hou. Exoproteome analysis of Pseudomonas aeru ginosa response to high alkane stress[J]. Archives of Microbiology, 2024, 206(1): 51.

24、Yunru Chen, Liang Dong, Weikang Sui, Mingyang Niu, Xingqian Cui, Kai-Uwe Hinrichs & Fengping Wang. Cycling and persistence of iron-bound organic carbon in subseafloor sediments[J]. Nature Communications, 2024, 15(1): 6370.

25、Xu Qiu, Xiao-Min Hu, Xi-Xiang Tang, Cai-Hua Huang, Hua-Hua Jian & Dong-Hai Lin. Metabolic adaptations of Microbacterium sediminis YLB-01 in deep-sea high-pressure environments[J]. Applied Microbiology and Biotechnology, 2024, 108(1): 170.
26、Yi-Xuan Zhao, Xiao Xiang, Xi-Peng Liu. The biochemical characterization of a TatD nuclease from Thermus thermophilus[J]. Protein Expression and Purification, 2024, 223: 106557.
27、Wei-Wei WangGang-Shun YiHuan Zhou2Yi-Xuan ZhaoQi-Sheng WangJian-Hua HeFeng YuXiang XiaoXi-Peng Liu. The structure of the archaeal nuclease RecJ2 implicates its catalytic mechanism and inability to interact with GINS[J]. Journal of Biological Chemistry, 2024, 300(6).

28、Deng Liu, Jinpeng Cao, Shanshan Yang, Yating Yin, Pengcong Wang, Dominic Papineau, Hongmei Wang, Xuan Qiu, Genming Luo, Zongmin Zhu & Fengping Wang. Microbially-mediated formation of Ca-Fe carbonates during dissimilatory ferrihydrite reduction: Implications for the origin of sedimentary ankerite[J]. Science China Earth Sciences, 2024, 67(1): 208-221.

29、刘邓,曹锦鹏,杨珊珊,殷雅婷,王鹏聪,Dominic PAPINEAU,王红梅,邱轩,罗根明,朱宗敏,王风平.微生物异化还原水铁矿介导的Ca-Fe碳酸盐矿物形成:对铁白云石成因的启示[J].中国科学:地球科学,2024,54(01):216-230.
30、王景,赵维殳,肖湘.大数据时代的深渊微生物研究[J].生命科学,2023,35(12):1630-1638.